Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.06■□□□□ 0.16
Lrch1P62046 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lrch1P62046 Gm45186-201ENSMUST00000206874 478 ntBASIC16.06■□□□□ 0.16
Lrch1P62046 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.06■□□□□ 0.16
Lrch1P62046 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.06■□□□□ 0.16
Lrch1P62046 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.06■□□□□ 0.16
Lrch1P62046 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Lrch1P62046 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lrch1P62046 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.05■□□□□ 0.16
Lrch1P62046 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lrch1P62046 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.05■□□□□ 0.16
Lrch1P62046 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lrch1P62046 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.05■□□□□ 0.16
Lrch1P62046 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Lrch1P62046 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.05■□□□□ 0.16
Lrch1P62046 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lrch1P62046 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lrch1P62046 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lrch1P62046 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Gm24830-201ENSMUST00000102024 166 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.04■□□□□ 0.16
Lrch1P62046 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.04■□□□□ 0.16
Lrch1P62046 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.04■□□□□ 0.16
Lrch1P62046 Gm25890-201ENSMUST00000177643 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Gm22614-201ENSMUST00000178300 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Gm22042-201ENSMUST00000082989 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Gm26232-201ENSMUST00000083360 166 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Gm24136-201ENSMUST00000083374 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Gm26110-201ENSMUST00000083971 165 ntBASIC16.04■□□□□ 0.16
Lrch1P62046 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrch1P62046 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrch1P62046 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.03■□□□□ 0.16
Lrch1P62046 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrch1P62046 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms