Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gm13015-201ENSMUST00000118674 204 ntBASIC12.1□□□□□ -0.47
Sec61a1P61620 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sec61a1P61620 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.1□□□□□ -0.47
Sec61a1P61620 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.1□□□□□ -0.47
Sec61a1P61620 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a1P61620 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.09□□□□□ -0.47
Sec61a1P61620 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.09□□□□□ -0.47
Sec61a1P61620 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm9824-201ENSMUST00000178707 561 ntBASIC12.09□□□□□ -0.47
Sec61a1P61620 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.09□□□□□ -0.47
Sec61a1P61620 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61a1P61620 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sec61a1P61620 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sec61a1P61620 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sec61a1P61620 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sec61a1P61620 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm6415-201ENSMUST00000118488 348 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm5479-201ENSMUST00000160578 435 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a1P61620 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.08□□□□□ -0.48
Sec61a1P61620 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms