Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.16□□□□□ -0.46
Sf3b6P59708 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm15427-201ENSMUST00000117288 531 ntBASIC12.16□□□□□ -0.46
Sf3b6P59708 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm14822-201ENSMUST00000122247 291 ntBASIC12.16□□□□□ -0.46
Sf3b6P59708 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.16□□□□□ -0.46
Sf3b6P59708 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.16□□□□□ -0.46
Sf3b6P59708 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm6973-201ENSMUST00000117080 721 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm29310-201ENSMUST00000185468 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21825-201ENSMUST00000185728 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm29109-201ENSMUST00000185895 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21896-201ENSMUST00000186520 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21873-201ENSMUST00000186728 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21794-201ENSMUST00000187056 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21880-201ENSMUST00000187275 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21826-201ENSMUST00000187451 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21198-201ENSMUST00000188393 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21749-201ENSMUST00000189343 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21901-201ENSMUST00000189568 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm29424-201ENSMUST00000189716 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm28599-201ENSMUST00000189838 694 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21867-201ENSMUST00000189917 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm29269-201ENSMUST00000190087 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21722-201ENSMUST00000190153 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm28423-201ENSMUST00000190701 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21899-201ENSMUST00000190745 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21910-201ENSMUST00000191163 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21849-201ENSMUST00000191571 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm28678-201ENSMUST00000191593 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm20910-201ENSMUST00000193268 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm21871-201ENSMUST00000194621 696 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.15□□□□□ -0.46
Sf3b6P59708 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sf3b6P59708 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sf3b6P59708 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3b6P59708 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3b6P59708 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3b6P59708 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3b6P59708 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sf3b6P59708 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sf3b6P59708 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sf3b6P59708 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms