Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.94□□□□□ -0.34
Nup43P59235 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nup43P59235 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.94□□□□□ -0.34
Nup43P59235 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nup43P59235 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nup43P59235 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.94□□□□□ -0.34
Nup43P59235 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.93□□□□□ -0.34
Nup43P59235 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nup43P59235 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Nup43P59235 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nup43P59235 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup43P59235 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.93□□□□□ -0.34
Nup43P59235 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup43P59235 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup43P59235 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup43P59235 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup43P59235 Gm5354-201ENSMUST00000182417 973 ntBASIC12.92□□□□□ -0.34
Nup43P59235 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Nup43P59235 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nup43P59235 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.92□□□□□ -0.34
Nup43P59235 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.92□□□□□ -0.34
Nup43P59235 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Nup43P59235 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup43P59235 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup43P59235 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms