Protein–RNA interactions for Protein: P56389

Cda, Cytidine deaminase, mousemouse

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CdaP56389 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CdaP56389 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CdaP56389 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CdaP56389 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CdaP56389 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
CdaP56389 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CdaP56389 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CdaP56389 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CdaP56389 Gm15693-201ENSMUST00000120470 637 ntBASIC12.28□□□□□ -0.44
CdaP56389 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Gm6736-201ENSMUST00000166583 948 ntBASIC12.28□□□□□ -0.44
CdaP56389 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.28□□□□□ -0.44
CdaP56389 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CdaP56389 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CdaP56389 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CdaP56389 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CdaP56389 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.28□□□□□ -0.44
CdaP56389 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CdaP56389 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CdaP56389 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CdaP56389 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CdaP56389 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CdaP56389 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CdaP56389 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CdaP56389 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Mir698-201ENSMUST00000102164 109 ntBASIC12.27□□□□□ -0.45
CdaP56389 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Gm15653-201ENSMUST00000119247 907 ntBASIC12.27□□□□□ -0.45
CdaP56389 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.27□□□□□ -0.45
CdaP56389 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.27□□□□□ -0.45
CdaP56389 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.27□□□□□ -0.45
CdaP56389 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CdaP56389 Gm27533-201ENSMUST00000183800 152 ntBASIC12.27□□□□□ -0.45
CdaP56389 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.27□□□□□ -0.45
CdaP56389 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.27□□□□□ -0.45
CdaP56389 Gm46209-201ENSMUST00000217912 553 ntBASIC12.27□□□□□ -0.45
CdaP56389 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.27□□□□□ -0.45
CdaP56389 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.27□□□□□ -0.45
CdaP56389 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.27□□□□□ -0.45
CdaP56389 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.27□□□□□ -0.45
CdaP56389 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.27□□□□□ -0.45
CdaP56389 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.27□□□□□ -0.45
CdaP56389 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.27□□□□□ -0.45
CdaP56389 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CdaP56389 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CdaP56389 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CdaP56389 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CdaP56389 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CdaP56389 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CdaP56389 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CdaP56389 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms