Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Psmc4P54775 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Psmc4P54775 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Psmc4P54775 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Psmc4P54775 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.53■□□□□ 0.08
Psmc4P54775 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Psmc4P54775 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Psmc4P54775 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Psmc4P54775 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Psmc4P54775 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Psmc4P54775 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Psmc4P54775 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.52■□□□□ 0.08
Psmc4P54775 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Psmc4P54775 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Psmc4P54775 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Psmc4P54775 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Psmc4P54775 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Psmc4P54775 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Psmc4P54775 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Psmc4P54775 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.51■□□□□ 0.07
Psmc4P54775 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Mir877-201ENSMUST00000104738 85 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 Gm26083-201ENSMUST00000157904 193 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.51■□□□□ 0.07
Psmc4P54775 Gm4271-201ENSMUST00000174444 973 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.51■□□□□ 0.07
Psmc4P54775 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Gm18935-201ENSMUST00000212692 664 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.51■□□□□ 0.07
Psmc4P54775 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Psmc4P54775 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Psmc4P54775 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Psmc4P54775 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Psmc4P54775 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Psmc4P54775 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.5■□□□□ 0.07
Psmc4P54775 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.5■□□□□ 0.07
Psmc4P54775 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.5■□□□□ 0.07
Psmc4P54775 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Gm38341-201ENSMUST00000195357 515 ntBASIC15.5■□□□□ 0.07
Psmc4P54775 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Gm5161-201ENSMUST00000075243 853 ntBASIC15.5■□□□□ 0.07
Psmc4P54775 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.5■□□□□ 0.07
Psmc4P54775 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Psmc4P54775 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms