Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Fdft1P53798 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.72□□□□□ -0.21
Fdft1P53798 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fdft1P53798 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.71□□□□□ -0.21
Fdft1P53798 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fdft1P53798 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fdft1P53798 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.71□□□□□ -0.21
Fdft1P53798 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fdft1P53798 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.71□□□□□ -0.21
Fdft1P53798 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fdft1P53798 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.71□□□□□ -0.22
Fdft1P53798 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Fdft1P53798 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fdft1P53798 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Fdft1P53798 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Gm25144-201ENSMUST00000179561 110 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Gm25352-201ENSMUST00000179815 110 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Gm33320-201ENSMUST00000192232 530 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Gm38294-201ENSMUST00000192831 381 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Gm46209-201ENSMUST00000217912 553 ntBASIC13.7□□□□□ -0.22
Fdft1P53798 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.7□□□□□ -0.22
Fdft1P53798 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Fdft1P53798 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Fdft1P53798 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fdft1P53798 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Fdft1P53798 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Fdft1P53798 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm15653-201ENSMUST00000119247 907 ntBASIC13.69□□□□□ -0.22
Fdft1P53798 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Fdft1P53798 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm27618-201ENSMUST00000183671 60 ntBASIC13.69□□□□□ -0.22
Fdft1P53798 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms