Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SqleP52019 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.8□□□□□ -0.04
SqleP52019 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SqleP52019 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Gm10434-201ENSMUST00000101158 471 ntBASIC14.79□□□□□ -0.04
SqleP52019 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SqleP52019 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SqleP52019 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SqleP52019 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.79□□□□□ -0.04
SqleP52019 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.79□□□□□ -0.04
SqleP52019 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SqleP52019 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.79□□□□□ -0.04
SqleP52019 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 BC037039-201ENSMUST00000192003 2205 ntBASIC14.79□□□□□ -0.04
SqleP52019 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Gm8099-201ENSMUST00000200510 742 ntBASIC14.79□□□□□ -0.04
SqleP52019 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.79□□□□□ -0.04
SqleP52019 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SqleP52019 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.79□□□□□ -0.04
SqleP52019 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SqleP52019 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SqleP52019 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SqleP52019 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SqleP52019 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SqleP52019 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SqleP52019 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.78□□□□□ -0.04
SqleP52019 Gm12403-201ENSMUST00000121384 959 ntBASIC14.78□□□□□ -0.04
SqleP52019 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.78□□□□□ -0.04
SqleP52019 Gm24548-201ENSMUST00000158650 108 ntBASIC14.78□□□□□ -0.04
SqleP52019 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.78□□□□□ -0.04
SqleP52019 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.78□□□□□ -0.04
SqleP52019 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.78□□□□□ -0.04
SqleP52019 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.78□□□□□ -0.04
SqleP52019 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SqleP52019 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.78□□□□□ -0.04
SqleP52019 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SqleP52019 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SqleP52019 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SqleP52019 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SqleP52019 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SqleP52019 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SqleP52019 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms