Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Shmt1P50431 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Shmt1P50431 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Shmt1P50431 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Shmt1P50431 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.46□□□□□ -0.09
Shmt1P50431 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Shmt1P50431 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Shmt1P50431 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Gm5161-201ENSMUST00000075243 853 ntBASIC14.46□□□□□ -0.09
Shmt1P50431 Gm24447-201ENSMUST00000083977 338 ntBASIC14.46□□□□□ -0.09
Shmt1P50431 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.46□□□□□ -0.09
Shmt1P50431 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Shmt1P50431 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shmt1P50431 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Shmt1P50431 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Shmt1P50431 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Shmt1P50431 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Shmt1P50431 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.45□□□□□ -0.1
Shmt1P50431 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Shmt1P50431 Gm8602-201ENSMUST00000184045 607 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 Gm2495-201ENSMUST00000191160 466 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.45□□□□□ -0.1
Shmt1P50431 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.45□□□□□ -0.1
Shmt1P50431 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Shmt1P50431 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Shmt1P50431 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Shmt1P50431 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Shmt1P50431 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.44□□□□□ -0.1
Shmt1P50431 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.44□□□□□ -0.1
Shmt1P50431 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.44□□□□□ -0.1
Shmt1P50431 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.44□□□□□ -0.1
Shmt1P50431 Gm25857-201ENSMUST00000082788 129 ntBASIC14.44□□□□□ -0.1
Shmt1P50431 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms