Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.02□□□□□ -0.16
SftpbP50405 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.02□□□□□ -0.16
SftpbP50405 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SftpbP50405 Gm11594-201ENSMUST00000122313 162 ntBASIC14.02□□□□□ -0.17
SftpbP50405 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.02□□□□□ -0.17
SftpbP50405 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.02□□□□□ -0.17
SftpbP50405 Gm43474-201ENSMUST00000196415 774 ntBASIC14.02□□□□□ -0.17
SftpbP50405 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.02□□□□□ -0.17
SftpbP50405 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.02□□□□□ -0.17
SftpbP50405 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SftpbP50405 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SftpbP50405 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SftpbP50405 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SftpbP50405 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.01□□□□□ -0.17
SftpbP50405 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Gm6916-202ENSMUST00000205523 195 ntBASIC14.01□□□□□ -0.17
SftpbP50405 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.01□□□□□ -0.17
SftpbP50405 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.01□□□□□ -0.17
SftpbP50405 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.01□□□□□ -0.17
SftpbP50405 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SftpbP50405 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SftpbP50405 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.01□□□□□ -0.17
SftpbP50405 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SftpbP50405 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Gm45003-201ENSMUST00000205875 2158 ntBASIC14□□□□□ -0.17
SftpbP50405 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
SftpbP50405 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SftpbP50405 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Gm10729-202ENSMUST00000193403 1375 ntBASIC14□□□□□ -0.17
SftpbP50405 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SftpbP50405 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14□□□□□ -0.17
SftpbP50405 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14□□□□□ -0.17
SftpbP50405 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14□□□□□ -0.17
SftpbP50405 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14□□□□□ -0.17
SftpbP50405 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms