Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SftpdP50404 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SftpdP50404 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SftpdP50404 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.42□□□□□ -0.1
SftpdP50404 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Acot6-202ENSMUST00000222921 3622 ntBASIC14.42□□□□□ -0.1
SftpdP50404 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.42□□□□□ -0.1
SftpdP50404 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SftpdP50404 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SftpdP50404 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SftpdP50404 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.41□□□□□ -0.1
SftpdP50404 Gm27437-201ENSMUST00000183429 107 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Gm42612-201ENSMUST00000197986 623 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Gm5279-201ENSMUST00000199575 745 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Gm43170-201ENSMUST00000199827 612 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.41□□□□□ -0.1
SftpdP50404 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.41□□□□□ -0.1
SftpdP50404 Gm6218-201ENSMUST00000219812 628 ntBASIC14.41□□□□□ -0.1
SftpdP50404 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SftpdP50404 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.41□□□□□ -0.1
SftpdP50404 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SftpdP50404 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SftpdP50404 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.41□□□□□ -0.1
SftpdP50404 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.4□□□□□ -0.1
SftpdP50404 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.4□□□□□ -0.1
SftpdP50404 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Syt7-205ENSMUST00000224135 1557 ntBASIC14.4□□□□□ -0.1
SftpdP50404 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.4□□□□□ -0.1
SftpdP50404 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SftpdP50404 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SftpdP50404 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SftpdP50404 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.4□□□□□ -0.1
SftpdP50404 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.4□□□□□ -0.1
SftpdP50404 Gm15770-201ENSMUST00000117498 584 ntBASIC14.4□□□□□ -0.1
SftpdP50404 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SftpdP50404 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.4□□□□□ -0.1
SftpdP50404 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SftpdP50404 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.4□□□□□ -0.1
SftpdP50404 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms