Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.36□□□□□ -0.11
Rfx2P48379 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx2P48379 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.35□□□□□ -0.11
Rfx2P48379 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfx2P48379 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Gm27701-201ENSMUST00000184498 110 ntBASIC14.35□□□□□ -0.11
Rfx2P48379 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.35□□□□□ -0.11
Rfx2P48379 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx2P48379 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Rfx2P48379 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfx2P48379 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfx2P48379 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx2P48379 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Rfx2P48379 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfx2P48379 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx2P48379 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.34□□□□□ -0.11
Rfx2P48379 Gm18307-201ENSMUST00000206864 949 ntBASIC14.34□□□□□ -0.11
Rfx2P48379 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.34□□□□□ -0.11
Rfx2P48379 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.34□□□□□ -0.11
Rfx2P48379 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfx2P48379 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.34□□□□□ -0.11
Rfx2P48379 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx2P48379 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfx2P48379 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rfx2P48379 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx2P48379 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Rfx2P48379 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rfx2P48379 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx2P48379 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx2P48379 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
Rfx2P48379 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx2P48379 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfx2P48379 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rfx2P48379 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.33□□□□□ -0.12
Rfx2P48379 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rfx2P48379 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rfx2P48379 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rfx2P48379 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfx2P48379 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfx2P48379 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms