Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.95□□□□□ -0.34
Nkx2-6P43688 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.95□□□□□ -0.34
Nkx2-6P43688 Gm27839-201ENSMUST00000184242 106 ntBASIC12.95□□□□□ -0.34
Nkx2-6P43688 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Gm7561-201ENSMUST00000211203 886 ntBASIC12.95□□□□□ -0.34
Nkx2-6P43688 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx2-6P43688 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm13226-201ENSMUST00000117838 404 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Snora78-201ENSMUST00000158630 128 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm24196-201ENSMUST00000179161 110 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Matn2-206ENSMUST00000228570 2798 ntBASIC12.94□□□□□ -0.34
Nkx2-6P43688 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-6P43688 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm13612-201ENSMUST00000119276 390 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm45784-201ENSMUST00000188360 142 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Gm5161-201ENSMUST00000075243 853 ntBASIC12.93□□□□□ -0.34
Nkx2-6P43688 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-6P43688 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-6P43688 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms