Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Gm16372-201ENSMUST00000073088 450 ntBASIC12.96□□□□□ -0.33
Cdx2P43241 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx2P43241 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx2P43241 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx2P43241 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdx2P43241 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.96□□□□□ -0.34
Cdx2P43241 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx2P43241 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx2P43241 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cdx2P43241 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdx2P43241 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Gm2445-201ENSMUST00000182798 989 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Cts7-204ENSMUST00000225321 1257 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cdx2P43241 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx2P43241 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Cdx2P43241 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.95□□□□□ -0.34
Cdx2P43241 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx2P43241 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
Cdx2P43241 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdx2P43241 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdx2P43241 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdx2P43241 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdx2P43241 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdx2P43241 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdx2P43241 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.94□□□□□ -0.34
Cdx2P43241 Gm38341-201ENSMUST00000195357 515 ntBASIC12.94□□□□□ -0.34
Cdx2P43241 Gm6334-201ENSMUST00000207083 228 ntBASIC12.94□□□□□ -0.34
Cdx2P43241 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdx2P43241 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdx2P43241 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.94□□□□□ -0.34
Cdx2P43241 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdx2P43241 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms