Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HttP42859 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.21□□□□□ -0.13
HttP42859 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.21□□□□□ -0.13
HttP42859 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.21□□□□□ -0.13
HttP42859 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
HttP42859 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HttP42859 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HttP42859 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HttP42859 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HttP42859 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HttP42859 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.21□□□□□ -0.14
HttP42859 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HttP42859 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.2□□□□□ -0.14
HttP42859 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HttP42859 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.2□□□□□ -0.14
HttP42859 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.2□□□□□ -0.14
HttP42859 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Gm25545-201ENSMUST00000122673 323 ntBASIC14.2□□□□□ -0.14
HttP42859 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.2□□□□□ -0.14
HttP42859 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.2□□□□□ -0.14
HttP42859 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.2□□□□□ -0.14
HttP42859 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Gm10076-201ENSMUST00000073238 384 ntBASIC14.2□□□□□ -0.14
HttP42859 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.2□□□□□ -0.14
HttP42859 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.2□□□□□ -0.14
HttP42859 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.2□□□□□ -0.14
HttP42859 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HttP42859 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HttP42859 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Gm17208-201ENSMUST00000168388 535 ntBASIC14.19□□□□□ -0.14
HttP42859 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.19□□□□□ -0.14
HttP42859 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.19□□□□□ -0.14
HttP42859 Gm18730-201ENSMUST00000218038 343 ntBASIC14.19□□□□□ -0.14
HttP42859 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.19□□□□□ -0.14
HttP42859 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.19□□□□□ -0.14
HttP42859 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HttP42859 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.19□□□□□ -0.14
HttP42859 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.19□□□□□ -0.14
HttP42859 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HttP42859 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HttP42859 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HttP42859 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.18□□□□□ -0.14
HttP42859 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gm2445-201ENSMUST00000182798 989 ntBASIC14.18□□□□□ -0.14
HttP42859 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
HttP42859 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.18□□□□□ -0.14
HttP42859 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HttP42859 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.18□□□□□ -0.14
HttP42859 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms