Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm17837-201ENSMUST00000186435 985 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21896-201ENSMUST00000186520 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21873-201ENSMUST00000186728 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21794-201ENSMUST00000187056 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21880-201ENSMUST00000187275 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21826-201ENSMUST00000187451 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21198-201ENSMUST00000188393 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21749-201ENSMUST00000189343 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21901-201ENSMUST00000189568 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm29424-201ENSMUST00000189716 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm28599-201ENSMUST00000189838 694 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21867-201ENSMUST00000189917 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm29269-201ENSMUST00000190087 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21722-201ENSMUST00000190153 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm28423-201ENSMUST00000190701 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21899-201ENSMUST00000190745 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21910-201ENSMUST00000191163 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21849-201ENSMUST00000191571 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm28678-201ENSMUST00000191593 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm20910-201ENSMUST00000193268 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm21871-201ENSMUST00000194621 696 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.66□□□□□ -0.22
LdlrP35951 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LdlrP35951 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LdlrP35951 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LdlrP35951 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LdlrP35951 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.65□□□□□ -0.22
LdlrP35951 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.65□□□□□ -0.22
LdlrP35951 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.65□□□□□ -0.22
LdlrP35951 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.65□□□□□ -0.22
LdlrP35951 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.65□□□□□ -0.22
LdlrP35951 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LdlrP35951 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LdlrP35951 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gm25144-201ENSMUST00000179561 110 ntBASIC13.64□□□□□ -0.23
LdlrP35951 Gm25352-201ENSMUST00000179815 110 ntBASIC13.64□□□□□ -0.23
LdlrP35951 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Gm38294-201ENSMUST00000192831 381 ntBASIC13.64□□□□□ -0.23
LdlrP35951 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.64□□□□□ -0.23
LdlrP35951 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.64□□□□□ -0.23
LdlrP35951 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.64□□□□□ -0.23
LdlrP35951 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LdlrP35951 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LdlrP35951 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.64□□□□□ -0.23
LdlrP35951 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms