Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfc1P35601 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.43□□□□□ -0.1
Rfc1P35601 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.43□□□□□ -0.1
Rfc1P35601 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.43□□□□□ -0.1
Rfc1P35601 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rfc1P35601 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rfc1P35601 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.43□□□□□ -0.1
Rfc1P35601 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Rfc1P35601 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rfc1P35601 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfc1P35601 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfc1P35601 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.42□□□□□ -0.1
Rfc1P35601 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfc1P35601 Gm37230-201ENSMUST00000194491 818 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.42□□□□□ -0.1
Rfc1P35601 Thap2-203ENSMUST00000218989 527 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Gm10154-201ENSMUST00000084445 354 ntBASIC14.42□□□□□ -0.1
Rfc1P35601 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Rfc1P35601 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfc1P35601 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfc1P35601 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfc1P35601 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfc1P35601 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfc1P35601 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Rfc1P35601 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfc1P35601 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Gm45098-201ENSMUST00000207179 657 ntBASIC14.41□□□□□ -0.1
Rfc1P35601 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.41□□□□□ -0.1
Rfc1P35601 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfc1P35601 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc1P35601 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms