Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.89□□□□□ -0.19
Slc6a13P31649 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.89□□□□□ -0.19
Slc6a13P31649 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Slc6a13P31649 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc6a13P31649 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm7488-201ENSMUST00000117148 684 ntBASIC13.88□□□□□ -0.19
Slc6a13P31649 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Slc6a13P31649 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.88□□□□□ -0.19
Slc6a13P31649 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.88□□□□□ -0.19
Slc6a13P31649 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Slc6a13P31649 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc6a13P31649 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a13P31649 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a13P31649 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Slc6a13P31649 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Gm15770-201ENSMUST00000117498 584 ntBASIC13.87□□□□□ -0.19
Slc6a13P31649 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Slc6a13P31649 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Slc6a13P31649 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Gm27772-201ENSMUST00000184900 187 ntBASIC13.87□□□□□ -0.19
Slc6a13P31649 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc6a13P31649 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms