Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.79□□□□□ -0.52
Slc6a1P31648 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Gm9182-201ENSMUST00000217829 639 ntBASIC11.79□□□□□ -0.52
Slc6a1P31648 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.79□□□□□ -0.52
Slc6a1P31648 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.79□□□□□ -0.52
Slc6a1P31648 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc6a1P31648 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a1P31648 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Slc6a1P31648 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.78□□□□□ -0.52
Slc6a1P31648 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Slc6a1P31648 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gm27301-201ENSMUST00000184012 127 ntBASIC11.78□□□□□ -0.52
Slc6a1P31648 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.78□□□□□ -0.52
Slc6a1P31648 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.78□□□□□ -0.52
Slc6a1P31648 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Slc6a1P31648 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.78□□□□□ -0.52
Slc6a1P31648 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc6a1P31648 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a1P31648 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a1P31648 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a1P31648 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a1P31648 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Slc6a1P31648 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc6a1P31648 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.77□□□□□ -0.53
Slc6a1P31648 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms