Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd28P31041 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cd28P31041 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cd28P31041 Gm6973-201ENSMUST00000117080 721 ntBASIC12.05□□□□□ -0.48
Cd28P31041 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Gm11543-201ENSMUST00000120758 370 ntBASIC12.05□□□□□ -0.48
Cd28P31041 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.05□□□□□ -0.48
Cd28P31041 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.05□□□□□ -0.48
Cd28P31041 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.05□□□□□ -0.48
Cd28P31041 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cd28P31041 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd28P31041 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cd28P31041 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Cd28P31041 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.04□□□□□ -0.48
Cd28P31041 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Cd28P31041 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cd28P31041 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd28P31041 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.04□□□□□ -0.48
Cd28P31041 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.04□□□□□ -0.48
Cd28P31041 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.04□□□□□ -0.48
Cd28P31041 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.04□□□□□ -0.48
Cd28P31041 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.04□□□□□ -0.48
Cd28P31041 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd28P31041 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd28P31041 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.03□□□□□ -0.48
Cd28P31041 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd28P31041 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.03□□□□□ -0.48
Cd28P31041 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cd28P31041 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.03□□□□□ -0.48
Cd28P31041 AA543401-201ENSMUST00000164248 1269 ntBASIC12.03□□□□□ -0.48
Cd28P31041 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd28P31041 Gm21362-201ENSMUST00000194272 928 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms