Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Gm7399-201ENSMUST00000032395 858 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vcam1P29533 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcam1P29533 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.66■□□□□ 0.1
Vcam1P29533 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Vcam1P29533 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Vcam1P29533 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcam1P29533 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcam1P29533 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Gm44069-201ENSMUST00000204898 506 ntBASIC15.65■□□□□ 0.1
Vcam1P29533 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Snora73a-201ENSMUST00000082453 205 ntBASIC15.65■□□□□ 0.1
Vcam1P29533 Gm10268-201ENSMUST00000085340 555 ntBASIC15.65■□□□□ 0.1
Vcam1P29533 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vcam1P29533 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcam1P29533 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vcam1P29533 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Vcam1P29533 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Gm38002-201ENSMUST00000193255 180 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Gm45880-201ENSMUST00000213041 853 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.64■□□□□ 0.09
Vcam1P29533 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.64■□□□□ 0.09
Vcam1P29533 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Vcam1P29533 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcam1P29533 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.63■□□□□ 0.09
Vcam1P29533 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Vcam1P29533 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms