Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Mmp3P28862 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Mmp3P28862 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Mmp3P28862 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Gm8062-201ENSMUST00000139696 444 ntBASIC14.61□□□□□ -0.07
Mmp3P28862 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.61□□□□□ -0.07
Mmp3P28862 Gm45841-201ENSMUST00000207700 164 ntBASIC14.61□□□□□ -0.07
Mmp3P28862 Gm40466-201ENSMUST00000212174 422 ntBASIC14.61□□□□□ -0.07
Mmp3P28862 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Mmp3P28862 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.61□□□□□ -0.07
Mmp3P28862 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.61□□□□□ -0.07
Mmp3P28862 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Mmp3P28862 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.6□□□□□ -0.07
Mmp3P28862 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.6□□□□□ -0.07
Mmp3P28862 Gm27331-201ENSMUST00000183705 60 ntBASIC14.6□□□□□ -0.07
Mmp3P28862 Gm37424-201ENSMUST00000191727 561 ntBASIC14.6□□□□□ -0.07
Mmp3P28862 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.6□□□□□ -0.07
Mmp3P28862 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.6□□□□□ -0.07
Mmp3P28862 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.6□□□□□ -0.07
Mmp3P28862 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.6□□□□□ -0.07
Mmp3P28862 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Mmp3P28862 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Mmp3P28862 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Mmp3P28862 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Gm13392-201ENSMUST00000117708 150 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Gm12203-201ENSMUST00000118235 598 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Gm12209-201ENSMUST00000120089 596 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Gm16177-201ENSMUST00000120728 718 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.59□□□□□ -0.07
Mmp3P28862 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.59□□□□□ -0.07
Mmp3P28862 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Mmp3P28862 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Mmp3P28862 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Mmp3P28862 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms