Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.63□□□□□ -0.23
Nckap1P28660 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Gm27847-201ENSMUST00000183711 107 ntBASIC13.63□□□□□ -0.23
Nckap1P28660 Gm27375-201ENSMUST00000183799 107 ntBASIC13.63□□□□□ -0.23
Nckap1P28660 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nckap1P28660 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.63□□□□□ -0.23
Nckap1P28660 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.63□□□□□ -0.23
Nckap1P28660 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nckap1P28660 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nckap1P28660 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nckap1P28660 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.62□□□□□ -0.23
Nckap1P28660 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.62□□□□□ -0.23
Nckap1P28660 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nckap1P28660 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gm45841-201ENSMUST00000207700 164 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gm9899-201ENSMUST00000065519 555 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Gm5161-201ENSMUST00000075243 853 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nckap1P28660 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nckap1P28660 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nckap1P28660 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.62□□□□□ -0.23
Nckap1P28660 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nckap1P28660 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.61□□□□□ -0.23
Nckap1P28660 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.61□□□□□ -0.23
Nckap1P28660 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm12742-201ENSMUST00000117326 410 ntBASIC13.61□□□□□ -0.23
Nckap1P28660 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.61□□□□□ -0.23
Nckap1P28660 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nckap1P28660 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nckap1P28660 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nckap1P28660 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms