Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Gm5859-201ENSMUST00000165401 2324 ntBASIC18.42■□□□□ 0.54
CenpbP27790 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.42■□□□□ 0.54
CenpbP27790 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Gm45532-201ENSMUST00000210342 3620 ntBASIC18.42■□□□□ 0.54
CenpbP27790 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC18.42■□□□□ 0.54
CenpbP27790 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CenpbP27790 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.41■□□□□ 0.54
CenpbP27790 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.41■□□□□ 0.54
CenpbP27790 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CenpbP27790 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.41■□□□□ 0.54
CenpbP27790 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.41■□□□□ 0.54
CenpbP27790 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CenpbP27790 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CenpbP27790 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CenpbP27790 Gm43051-201ENSMUST00000201096 2678 ntBASIC18.4■□□□□ 0.54
CenpbP27790 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC18.4■□□□□ 0.54
CenpbP27790 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CenpbP27790 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.4■□□□□ 0.54
CenpbP27790 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.4■□□□□ 0.54
CenpbP27790 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
CenpbP27790 Gm12497-201ENSMUST00000138778 237 ntBASIC18.4■□□□□ 0.54
CenpbP27790 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.4■□□□□ 0.54
CenpbP27790 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CenpbP27790 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CenpbP27790 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC18.4■□□□□ 0.54
CenpbP27790 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CenpbP27790 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CenpbP27790 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CenpbP27790 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC18.39■□□□□ 0.53
CenpbP27790 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CenpbP27790 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CenpbP27790 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CenpbP27790 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CenpbP27790 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CenpbP27790 Gm8097-201ENSMUST00000117903 829 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm11452-201ENSMUST00000122376 690 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.39■□□□□ 0.53
CenpbP27790 Gm27741-201ENSMUST00000185060 237 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44357-201ENSMUST00000195897 142 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm19658-201ENSMUST00000196231 138 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44367-201ENSMUST00000196836 138 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44350-201ENSMUST00000197197 138 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44390-201ENSMUST00000197533 144 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44313-201ENSMUST00000198018 138 ntBASIC18.39■□□□□ 0.53
CenpbP27790 Gm44486-201ENSMUST00000198508 138 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms