Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.08□□□□□ -0.64
Cdx1P18111 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdx1P18111 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.08□□□□□ -0.64
Cdx1P18111 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdx1P18111 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdx1P18111 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Cdx1P18111 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.08□□□□□ -0.64
Cdx1P18111 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx1P18111 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Cdx1P18111 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdx1P18111 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Gm14057-201ENSMUST00000120631 482 ntBASIC11.07□□□□□ -0.64
Cdx1P18111 Gm13597-201ENSMUST00000121239 375 ntBASIC11.07□□□□□ -0.64
Cdx1P18111 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cdx1P18111 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdx1P18111 Gm5177-201ENSMUST00000183092 997 ntBASIC11.07□□□□□ -0.64
Cdx1P18111 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cdx1P18111 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.07□□□□□ -0.64
Cdx1P18111 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.07□□□□□ -0.64
Cdx1P18111 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cdx1P18111 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx1P18111 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdx1P18111 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.06□□□□□ -0.64
Cdx1P18111 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.06□□□□□ -0.64
Cdx1P18111 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdx1P18111 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Cdx1P18111 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdx1P18111 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.06□□□□□ -0.64
Cdx1P18111 Gm45747-201ENSMUST00000212203 999 ntBASIC11.06□□□□□ -0.64
Cdx1P18111 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.06□□□□□ -0.64
Cdx1P18111 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms