Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Chmp6P0C0A3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.92□□□□□ -0.02
Chmp6P0C0A3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp6P0C0A3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp6P0C0A3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms