Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxb8P09632 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Mir1247-201ENSMUST00000116706 82 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm12928-201ENSMUST00000117115 573 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm27731-201ENSMUST00000185192 107 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm19078-201ENSMUST00000206311 727 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.58□□□□□ -0.08
Hoxb8P09632 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Hoxb8P09632 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxb8P09632 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Gm11524-201ENSMUST00000119349 807 ntBASIC14.57□□□□□ -0.08
Hoxb8P09632 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxb8P09632 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Gm7561-201ENSMUST00000211203 886 ntBASIC14.57□□□□□ -0.08
Hoxb8P09632 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.57□□□□□ -0.08
Hoxb8P09632 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxb8P09632 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxb8P09632 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.56□□□□□ -0.08
Hoxb8P09632 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hoxb8P09632 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Hoxb8P09632 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Hoxb8P09632 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Hoxb8P09632 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxb8P09632 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms