Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Gm8337-201ENSMUST00000187358 1938 ntBASIC20.28■□□□□ 0.84
NclP09405 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC20.28■□□□□ 0.84
NclP09405 Gm8652-201ENSMUST00000181363 964 ntBASIC20.28■□□□□ 0.84
NclP09405 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC20.28■□□□□ 0.84
NclP09405 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NclP09405 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC20.28■□□□□ 0.84
NclP09405 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NclP09405 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
NclP09405 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC20.27■□□□□ 0.84
NclP09405 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC20.27■□□□□ 0.84
NclP09405 Gm38671-201ENSMUST00000200573 130 ntBASIC20.27■□□□□ 0.84
NclP09405 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC20.27■□□□□ 0.84
NclP09405 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.27■□□□□ 0.84
NclP09405 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC20.27■□□□□ 0.84
NclP09405 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NclP09405 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC20.27■□□□□ 0.84
NclP09405 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NclP09405 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NclP09405 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NclP09405 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NclP09405 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NclP09405 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NclP09405 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Gm13612-201ENSMUST00000119276 390 ntBASIC20.26■□□□□ 0.83
NclP09405 Gm27847-201ENSMUST00000183711 107 ntBASIC20.26■□□□□ 0.83
NclP09405 Gm27375-201ENSMUST00000183799 107 ntBASIC20.26■□□□□ 0.83
NclP09405 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.26■□□□□ 0.83
NclP09405 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC20.26■□□□□ 0.83
NclP09405 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NclP09405 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NclP09405 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20.25■□□□□ 0.83
NclP09405 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Gm28182-201ENSMUST00000188354 2477 ntBASIC20.25■□□□□ 0.83
NclP09405 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Gm15770-201ENSMUST00000117498 584 ntBASIC20.25■□□□□ 0.83
NclP09405 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NclP09405 Mir1982-201ENSMUST00000157368 74 ntBASIC20.25■□□□□ 0.83
NclP09405 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NclP09405 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NclP09405 Gm43056-201ENSMUST00000197865 2791 ntBASIC20.24■□□□□ 0.83
NclP09405 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NclP09405 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NclP09405 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NclP09405 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NclP09405 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms