Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.93□□□□□ -0.34
Krt1P04104 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Krt1P04104 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.93□□□□□ -0.34
Krt1P04104 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.93□□□□□ -0.34
Krt1P04104 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.93□□□□□ -0.34
Krt1P04104 Gm10154-201ENSMUST00000084445 354 ntBASIC12.93□□□□□ -0.34
Krt1P04104 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Krt1P04104 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Krt1P04104 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt1P04104 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Gm25990-201ENSMUST00000102440 86 ntBASIC12.92□□□□□ -0.34
Krt1P04104 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Gm7284-201ENSMUST00000131667 944 ntBASIC12.92□□□□□ -0.34
Krt1P04104 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.92□□□□□ -0.34
Krt1P04104 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Krt1P04104 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Krt1P04104 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Krt1P04104 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Krt1P04104 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Krt1P04104 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Krt1P04104 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.91□□□□□ -0.34
Krt1P04104 Gm4899-201ENSMUST00000178708 719 ntBASIC12.91□□□□□ -0.34
Krt1P04104 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.91□□□□□ -0.34
Krt1P04104 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Krt1P04104 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms