Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Setdb1O88974 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Setdb1O88974 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.67■□□□□ 0.26
Setdb1O88974 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.67■□□□□ 0.26
Setdb1O88974 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.67■□□□□ 0.26
Setdb1O88974 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Setdb1O88974 Gm43133-201ENSMUST00000197472 463 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.67■□□□□ 0.26
Setdb1O88974 Gm45865-201ENSMUST00000211815 945 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Gm29705-201ENSMUST00000212598 474 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Setdb1O88974 Gm25007-201ENSMUST00000083808 133 ntBASIC16.67■□□□□ 0.26
Setdb1O88974 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Setdb1O88974 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm12485-201ENSMUST00000119641 291 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Gm11434-201ENSMUST00000122379 629 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Gm37008-201ENSMUST00000195712 319 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.66■□□□□ 0.26
Setdb1O88974 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.66■□□□□ 0.26
Setdb1O88974 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.66■□□□□ 0.26
Setdb1O88974 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Setdb1O88974 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Setdb1O88974 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Setdb1O88974 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.65■□□□□ 0.26
Setdb1O88974 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.65■□□□□ 0.26
Setdb1O88974 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Setdb1O88974 Gm10156-201ENSMUST00000122364 462 ntBASIC16.65■□□□□ 0.26
Setdb1O88974 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.65■□□□□ 0.26
Setdb1O88974 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.65■□□□□ 0.26
Setdb1O88974 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.65■□□□□ 0.26
Setdb1O88974 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Setdb1O88974 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms