Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ClppO88696 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ClppO88696 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ClppO88696 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ClppO88696 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClppO88696 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
ClppO88696 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.43□□□□□ -0.26
ClppO88696 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.43□□□□□ -0.26
ClppO88696 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.43□□□□□ -0.26
ClppO88696 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ClppO88696 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.43□□□□□ -0.26
ClppO88696 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.43□□□□□ -0.26
ClppO88696 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ClppO88696 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ClppO88696 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ClppO88696 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.42□□□□□ -0.26
ClppO88696 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.42□□□□□ -0.26
ClppO88696 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.42□□□□□ -0.26
ClppO88696 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ClppO88696 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.42□□□□□ -0.26
ClppO88696 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 Gm6745-201ENSMUST00000199216 526 ntBASIC13.42□□□□□ -0.26
ClppO88696 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.42□□□□□ -0.26
ClppO88696 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.42□□□□□ -0.26
ClppO88696 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Gm6180-201ENSMUST00000065243 498 ntBASIC13.42□□□□□ -0.26
ClppO88696 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
ClppO88696 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
ClppO88696 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ClppO88696 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.41□□□□□ -0.26
ClppO88696 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
ClppO88696 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClppO88696 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
ClppO88696 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.41□□□□□ -0.26
ClppO88696 Gm11478-201ENSMUST00000117851 599 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms