Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Mir8117-201ENSMUST00000184773 107 ntBASIC12.64□□□□□ -0.39
Cops4O88544 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.64□□□□□ -0.39
Cops4O88544 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.64□□□□□ -0.39
Cops4O88544 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cops4O88544 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cops4O88544 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cops4O88544 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cops4O88544 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cops4O88544 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Cops4O88544 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cops4O88544 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cops4O88544 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cops4O88544 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cops4O88544 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Cops4O88544 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.63□□□□□ -0.39
Cops4O88544 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.63□□□□□ -0.39
Cops4O88544 Mir3113-201ENSMUST00000175478 76 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.63□□□□□ -0.39
Cops4O88544 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cops4O88544 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cops4O88544 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cops4O88544 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Cops4O88544 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cops4O88544 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.62□□□□□ -0.39
Cops4O88544 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Cops4O88544 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cops4O88544 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 Gm15427-201ENSMUST00000117288 531 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Gm11543-201ENSMUST00000120758 370 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.62□□□□□ -0.39
Cops4O88544 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cops4O88544 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cops4O88544 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cops4O88544 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cops4O88544 Gm27920-201ENSMUST00000183953 96 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.62□□□□□ -0.39
Cops4O88544 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.62□□□□□ -0.39
Cops4O88544 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.62□□□□□ -0.39
Cops4O88544 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms