Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Dnmt3aO88508 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm29741-201ENSMUST00000192667 421 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm7730-201ENSMUST00000212486 454 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.8□□□□□ -0.2
Dnmt3aO88508 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Dnmt3aO88508 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.79□□□□□ -0.2
Dnmt3aO88508 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.79□□□□□ -0.2
Dnmt3aO88508 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Dnmt3aO88508 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.78□□□□□ -0.2
Dnmt3aO88508 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.78□□□□□ -0.2
Dnmt3aO88508 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Dnmt3aO88508 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms