Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Vti1bO88384 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vti1bO88384 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1bO88384 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1bO88384 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1bO88384 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1bO88384 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1bO88384 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vti1bO88384 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vti1bO88384 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vti1bO88384 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.08□□□□□ -0.32
Vti1bO88384 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.08□□□□□ -0.32
Vti1bO88384 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.08□□□□□ -0.32
Vti1bO88384 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Vti1bO88384 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vti1bO88384 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.08□□□□□ -0.32
Vti1bO88384 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1bO88384 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.07□□□□□ -0.32
Vti1bO88384 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm5566-201ENSMUST00000116118 459 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Gm6415-201ENSMUST00000118488 348 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.07□□□□□ -0.32
Vti1bO88384 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm25948-201ENSMUST00000175334 112 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.07□□□□□ -0.32
Vti1bO88384 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.07□□□□□ -0.32
Vti1bO88384 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Vti1bO88384 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vti1bO88384 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms