Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Gm12566-201ENSMUST00000121479 359 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.17□□□□□ -0.46
Col5a1O88207 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.17□□□□□ -0.46
Col5a1O88207 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col5a1O88207 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col5a1O88207 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col5a1O88207 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm12217-201ENSMUST00000118858 696 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.16□□□□□ -0.46
Col5a1O88207 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col5a1O88207 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.16□□□□□ -0.46
Col5a1O88207 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col5a1O88207 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm24830-201ENSMUST00000102024 166 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm7857-201ENSMUST00000117957 358 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.16□□□□□ -0.46
Col5a1O88207 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm25890-201ENSMUST00000177643 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gm22614-201ENSMUST00000178300 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm37489-201ENSMUST00000191883 159 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col5a1O88207 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.16□□□□□ -0.46
Col5a1O88207 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Gm22042-201ENSMUST00000082989 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gm26232-201ENSMUST00000083360 166 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gm24136-201ENSMUST00000083374 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Gm26110-201ENSMUST00000083971 165 ntBASIC12.16□□□□□ -0.46
Col5a1O88207 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col5a1O88207 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col5a1O88207 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.15□□□□□ -0.46
Col5a1O88207 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms