Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dkk1O54908 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Gm25287-201ENSMUST00000103846 110 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Gm22918-201ENSMUST00000103855 110 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Dkk1O54908 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Gm6321-201ENSMUST00000194460 1090 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Gm43743-201ENSMUST00000197898 697 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Gm43005-201ENSMUST00000199015 648 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Gm42640-201ENSMUST00000199792 1195 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Gm19170-201ENSMUST00000212440 1084 ntBASIC12.54□□□□□ -0.4
Dkk1O54908 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Myl1-201ENSMUST00000027151 1082 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Dkk1O54908 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Dkk1O54908 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Dkk1O54908 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
Dkk1O54908 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Dkk1O54908 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dkk1O54908 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Dkk1O54908 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Dkk1O54908 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Dkk1O54908 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Dkk1O54908 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Gm26143-201ENSMUST00000104480 108 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.53□□□□□ -0.4
Dkk1O54908 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Gm12387-201ENSMUST00000118573 955 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 Gm11480-201ENSMUST00000120214 659 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dkk1O54908 Gm44335-201ENSMUST00000196879 141 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 Gm44297-201ENSMUST00000198304 141 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 Gm44346-201ENSMUST00000198851 141 ntBASIC12.53□□□□□ -0.4
Dkk1O54908 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC12.53□□□□□ -0.4
Dkk1O54908 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms