Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ptch2O35595 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ptch2O35595 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptch2O35595 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.03□□□□□ -0.16
Ptch2O35595 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Gm27847-201ENSMUST00000183711 107 ntBASIC14.03□□□□□ -0.16
Ptch2O35595 Gm27375-201ENSMUST00000183799 107 ntBASIC14.03□□□□□ -0.16
Ptch2O35595 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.03□□□□□ -0.16
Ptch2O35595 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Ptch2O35595 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ptch2O35595 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ptch2O35595 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ptch2O35595 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.02□□□□□ -0.16
Ptch2O35595 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ptch2O35595 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.02□□□□□ -0.16
Ptch2O35595 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.02□□□□□ -0.16
Ptch2O35595 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ptch2O35595 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.02□□□□□ -0.16
Ptch2O35595 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Gm14660-201ENSMUST00000119809 575 ntBASIC14.02□□□□□ -0.17
Ptch2O35595 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.02□□□□□ -0.17
Ptch2O35595 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ptch2O35595 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.02□□□□□ -0.17
Ptch2O35595 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Gm10012-201ENSMUST00000078252 192 ntBASIC14.02□□□□□ -0.17
Ptch2O35595 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.02□□□□□ -0.17
Ptch2O35595 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.02□□□□□ -0.17
Ptch2O35595 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Ptch2O35595 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ptch2O35595 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ptch2O35595 Mir698-201ENSMUST00000102164 109 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Gm13392-201ENSMUST00000117708 150 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ptch2O35595 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Gm27731-201ENSMUST00000185192 107 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Gm45784-201ENSMUST00000188360 142 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.01□□□□□ -0.17
Ptch2O35595 Gm38671-201ENSMUST00000200573 130 ntBASIC14.01□□□□□ -0.17
Ptch2O35595 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ptch2O35595 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ptch2O35595 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ptch2O35595 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ptch2O35595 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ptch2O35595 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptch2O35595 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ptch2O35595 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptch2O35595 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ptch2O35595 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ptch2O35595 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms