Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.9□□□□□ -0.34
Cx3cl1O35188 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cx3cl1O35188 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cx3cl1O35188 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cx3cl1O35188 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cx3cl1O35188 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cx3cl1O35188 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Mir698-201ENSMUST00000102164 109 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm28760-201ENSMUST00000185995 736 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm42612-201ENSMUST00000197986 623 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm43170-201ENSMUST00000199827 612 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm17795-201ENSMUST00000214505 757 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.89□□□□□ -0.35
Cx3cl1O35188 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cx3cl1O35188 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.88□□□□□ -0.35
Cx3cl1O35188 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gm15240-201ENSMUST00000118156 720 ntBASIC12.88□□□□□ -0.35
Cx3cl1O35188 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gm24420-201ENSMUST00000176676 59 ntBASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.88□□□□□ -0.35
Cx3cl1O35188 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.88□□□□□ -0.35
Cx3cl1O35188 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.88□□□□□ -0.35
Cx3cl1O35188 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cx3cl1O35188 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm18905-201ENSMUST00000205454 928 ntBASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.87□□□□□ -0.35
Cx3cl1O35188 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.87□□□□□ -0.35
Cx3cl1O35188 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms