Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.49□□□□□ -0.41
Shisa8J3QNX5 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shisa8J3QNX5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm15427-201ENSMUST00000117288 531 ntBASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Shisa8J3QNX5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm18195-201ENSMUST00000207604 706 ntBASIC12.47□□□□□ -0.41
Shisa8J3QNX5 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Shisa8J3QNX5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Shisa8J3QNX5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms