Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.42■□□□□ 0.22
NpcdF8VQB8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.42■□□□□ 0.22
NpcdF8VQB8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.42■□□□□ 0.22
NpcdF8VQB8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.42■□□□□ 0.22
NpcdF8VQB8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NpcdF8VQB8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Mir686-201ENSMUST00000102174 109 ntBASIC16.41■□□□□ 0.22
NpcdF8VQB8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.41■□□□□ 0.22
NpcdF8VQB8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
NpcdF8VQB8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gm15370-201ENSMUST00000117158 253 ntBASIC16.4■□□□□ 0.22
NpcdF8VQB8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.4■□□□□ 0.22
NpcdF8VQB8 Gm7046-201ENSMUST00000221351 977 ntBASIC16.4■□□□□ 0.22
NpcdF8VQB8 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.4■□□□□ 0.22
NpcdF8VQB8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.4■□□□□ 0.22
NpcdF8VQB8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NpcdF8VQB8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
NpcdF8VQB8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
NpcdF8VQB8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
NpcdF8VQB8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.39■□□□□ 0.22
NpcdF8VQB8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Gm13461-201ENSMUST00000120980 662 ntBASIC16.39■□□□□ 0.21
NpcdF8VQB8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.39■□□□□ 0.21
NpcdF8VQB8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms