Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Gm5878E9PUB3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm15074-201ENSMUST00000117603 936 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm37293-201ENSMUST00000191658 295 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm10253-201ENSMUST00000194270 940 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm44335-201ENSMUST00000196879 141 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm44297-201ENSMUST00000198304 141 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm44346-201ENSMUST00000198851 141 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 AW822252-206ENSMUST00000208904 237 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.36□□□□□ -0.75
Gm5878E9PUB3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm5878E9PUB3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gm28630-201ENSMUST00000187806 498 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gm9229-201ENSMUST00000222777 126 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.35□□□□□ -0.75
Gm5878E9PUB3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms