Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm3543D3Z235 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3543D3Z235 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm21470-201ENSMUST00000187680 696 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm6218-201ENSMUST00000219812 628 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Matn2-206ENSMUST00000228570 2798 ntBASIC12.41□□□□□ -0.42
Gm3543D3Z235 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm3543D3Z235 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gm12859-201ENSMUST00000117834 427 ntBASIC12.4□□□□□ -0.42
Gm3543D3Z235 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.4□□□□□ -0.42
Gm3543D3Z235 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm3543D3Z235 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.4□□□□□ -0.43
Gm3543D3Z235 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3543D3Z235 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm3543D3Z235 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms