Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Gm38223-201ENSMUST00000194484 695 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Gm15371-201ENSMUST00000117057 784 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Gm6023-201ENSMUST00000118217 606 ntBASIC12.26□□□□□ -0.45
Shank1D3YZU1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Shank1D3YZU1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm13786-201ENSMUST00000122371 333 ntBASIC12.25□□□□□ -0.45
Shank1D3YZU1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.25□□□□□ -0.45
Shank1D3YZU1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Shank1D3YZU1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.24□□□□□ -0.45
Shank1D3YZU1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.24□□□□□ -0.45
Shank1D3YZU1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shank1D3YZU1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms