Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clip3B9EHT4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.32□□□□□ -0.28
Clip3B9EHT4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gm12859-201ENSMUST00000117834 427 ntBASIC13.32□□□□□ -0.28
Clip3B9EHT4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.32□□□□□ -0.28
Clip3B9EHT4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.32□□□□□ -0.28
Clip3B9EHT4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip3B9EHT4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Paupar-201ENSMUST00000194826 3482 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm21470-201ENSMUST00000187680 696 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm42612-201ENSMUST00000197986 623 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm43170-201ENSMUST00000199827 612 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm9797-201ENSMUST00000052902 613 ntBASIC13.31□□□□□ -0.28
Clip3B9EHT4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip3B9EHT4 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms