Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.65□□□□□ -0.38
Slc22a28B2RT89 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.65□□□□□ -0.39
Slc22a28B2RT89 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc22a28B2RT89 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc22a28B2RT89 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Slc22a28B2RT89 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc22a28B2RT89 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm4804-201ENSMUST00000182234 999 ntBASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm43474-201ENSMUST00000196415 774 ntBASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm5425-201ENSMUST00000214125 459 ntBASIC12.64□□□□□ -0.39
Slc22a28B2RT89 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc22a28B2RT89 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm44335-201ENSMUST00000196879 141 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm44297-201ENSMUST00000198304 141 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm44346-201ENSMUST00000198851 141 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Slc22a28B2RT89 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.62□□□□□ -0.39
Slc22a28B2RT89 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc22a28B2RT89 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms