Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd6A3KFM7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chd6A3KFM7 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm18027-201ENSMUST00000218947 619 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm19163-201ENSMUST00000223313 780 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm5340-201ENSMUST00000203733 880 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.97□□□□□ -0.65
Chd6A3KFM7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chd6A3KFM7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.96□□□□□ -0.65
Chd6A3KFM7 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Gm26361-201ENSMUST00000158868 186 ntBASIC10.96□□□□□ -0.65
Chd6A3KFM7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Gm45224-201ENSMUST00000208203 414 ntBASIC10.96□□□□□ -0.65
Chd6A3KFM7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chd6A3KFM7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.96□□□□□ -0.66
Chd6A3KFM7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.96□□□□□ -0.66
Chd6A3KFM7 Gm5369-201ENSMUST00000217499 588 ntBASIC10.96□□□□□ -0.66
Chd6A3KFM7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.96□□□□□ -0.66
Chd6A3KFM7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.96□□□□□ -0.66
Chd6A3KFM7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.96□□□□□ -0.66
Chd6A3KFM7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Gm11980-201ENSMUST00000121445 986 ntBASIC10.95□□□□□ -0.66
Chd6A3KFM7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Gm45433-201ENSMUST00000209386 247 ntBASIC10.95□□□□□ -0.66
Chd6A3KFM7 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.95□□□□□ -0.66
Chd6A3KFM7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms