Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm42627-201ENSMUST00000197347 224 ntBASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Olfr284-202ENSMUST00000206647 966 ntBASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm10608-202ENSMUST00000213924 676 ntBASIC13.3□□□□□ -0.28
Col9a3A2ACT7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Cts7-204ENSMUST00000225321 1257 ntBASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col9a3A2ACT7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Gm15236-201ENSMUST00000117309 379 ntBASIC13.29□□□□□ -0.28
Col9a3A2ACT7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Gm38341-201ENSMUST00000195357 515 ntBASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col9a3A2ACT7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm11618-201ENSMUST00000117946 267 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm13123-201ENSMUST00000122173 492 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm44364-201ENSMUST00000198368 141 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm9368-201ENSMUST00000219348 831 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col9a3A2ACT7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms