Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Gm10253-201ENSMUST00000194270 940 ntBASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Gm43514-201ENSMUST00000198852 424 ntBASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc112A0AUP1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm15653-201ENSMUST00000119247 907 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm15693-201ENSMUST00000120470 637 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm21470-201ENSMUST00000187680 696 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm5779-201ENSMUST00000218467 910 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Shd-206ENSMUST00000225145 998 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc112A0AUP1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gm6415-201ENSMUST00000118488 348 ntBASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc112A0AUP1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms