Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm15653-201ENSMUST00000119247 907 ntBASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc194A0A140LIT1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Mir698-201ENSMUST00000102164 109 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gm6415-201ENSMUST00000118488 348 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gm5312-201ENSMUST00000203728 547 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc194A0A140LIT1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Mir1897-201ENSMUST00000122581 272 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc194A0A140LIT1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms