Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Matn2-203ENSMUST00000226766 3252 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm12895-201ENSMUST00000122214 226 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm27646-201ENSMUST00000183989 110 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm6296-201ENSMUST00000222599 943 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 AC151836.1-202ENSMUST00000226259 753 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav8-1A0A075B641 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm13836-201ENSMUST00000121159 501 ntBASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav8-1A0A075B641 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms